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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs2071525 chr16:20787945 A/G 4.8E-5 490 16.37 14.67 17.47 KM Plot
THCA rs2071666 chr4:3290403 A/G 8.18E-5 477 12.07 16.02 17.42 KM Plot
THCA rs2071704 chr4:3240159 C/T 0.000121 476 16.67 14.77 14.77 KM Plot
THCA rs2072921 chr1:22405398 G/A 4.99E-8 487 15.23 17.73 9.47 KM Plot
THCA rs2073259 chr6:153345647 G/A 7.44E-5 466 16.2 14.93 16.77 KM Plot
THCA rs2074541 chr16:20789335 G/A 4.8E-5 490 16.37 14.67 17.47 KM Plot
THCA rs2074542 chr16:20792914 A/C 4.8E-5 490 16.37 14.67 17.47 KM Plot
THCA rs2077808 chr1:45988115 G/A 7.06E-5 486 10.8 16.18 16.87 KM Plot
THCA rs2083239 chr15:41528550 T/C 0.000264 476 15.17 15.87 17.7 KM Plot
THCA rs2099637 chr14:59689943 C/A 0 488 15.9 16.4 3.53 KM Plot
THCA rs2099919 chr4:16096689 T/C 8.13E-9 478 17.02 14.03 8.37 KM Plot
THCA rs2107385 chr7:26431210 G/A 5.79E-6 476 15.9 13.93 21.33 KM Plot
THCA rs2112360 chr5:114638909 C/T 1.29E-8 479 17.77 16.45 15.27 KM Plot
THCA rs2112361 chr5:114638913 T/C 1.45E-11 480 16.98 16.45 15.27 KM Plot
THCA rs2112494 chr16:21045369 A/G 1.6E-6 488 16.33 14 27.1 KM Plot